Function reference • ggtranscript

All functions

add_exon_number(): Add exon number

add_utr(): Add untranslated regions (UTRs)

geom_intron(): Plot intron lines with strand arrows

geom_junction(): Plot junction curves

geom_junction_label_repel(): Label junction curves

geom_range() geom_half_range(): Plot genomic ranges

ggtranscript: ggtranscript: Visualizing transcript structure and annotation using ggplot2

shorten_gaps(): Improve transcript structure visualization by shortening gaps

sod1_annotation pknox1_annotation: Example transcript annotation

sod1_junctions: Example junctions

to_diff(): Obtain the differences between transcript structure

to_intron(): Convert exon co-ordinates to introns