Updates geoms to work with the latest version of ggplot2 and ggrepel (R version 4.4).
Fixes all unit tests.
Fixes CI workflow issues and simplifies testing to linux-only.
ggtranscript 0.99.9
NEW FEATURES
Address ggtranscript reviews; update docs with examples of using gtf/bed files, integration with ggplot2 extensions and add usage of shorten_gaps() to README.
ggtranscript 0.99.8
NEW FEATURES
Address CRAN feedback; changing ggplot2 -> ‘ggplot2’, remove biocViews and contributing, removing Date field in DESCRIPTION.
ggtranscript 0.99.7
NEW FEATURES
Add cran-comments.md in preparation for first CRAN submission.
Update CI to run R CMD Check on latest R version (4.2).
ggtranscript 0.99.6
NEW FEATURES
Add @return documentation for geom_* functions for BiocCheck.
ggtranscript 0.99.5
NEW FEATURES
Change branch to naming from main to master to match BBS.
ggtranscript 0.99.4
NEW FEATURES
Change email to UCL email for Bioconductor submission.
NEW FEATURES
Add add_utr() for adding UTRs as ranges. This helper function is designed to work with shorten_gaps(), enabling shortening of gaps whilst visually differentiating UTRs from the CDS.
Allow to_intron() to take CDS and UTRs ranges as input.