codino

Calculating amino acid frequencies from codon design, and vice versa

Installation

pip install codino

Usage

Below gives a simple example of how to use codino. If you are interested to see how codino performs on more complicated examples, please see the example page of the documentation.

from codino.process import Converter

c = Converter()

# converting from codon design to AA frequencies
c.cd_to_aa(first = {"A": 1}, second = {"T": 1}, third = {"G": 1})
# Out: {'M': 1}

# converting from AA frequency to codon design
c.aa_to_cd(aa={'M': 1})
# Out: ({'A': 1.0}, {'T': 1.0}, {'G': 1.0})

Contributing

Interested in contributing? Check out the contributing guidelines. Please note that this project is released with a Code of Conduct. By contributing to this project, you agree to abide by its terms.

License

codino was created by David Zhang. It is licensed under the terms of the MIT license.

Credits

codino was created with cookiecutter and the py-pkgs-cookiecutter template.